ampliSeqRNA plugin
The ampliSeqRNA plugin is used with the Ion AmpliSeq™ Transcriptome Human Gene Expression Kit, Ion AmpliSeq™ Transcriptome Mouse Gene Expression Kit, or Ion AmpliSeq™ RNA panels. The plugin generates statistics, downloadable data files, and interactive visualizations that represent targeted RNA transcripts.
Use the ampliSeqRNA plugin on runs that are aligned to the human or mouse transcriptome references and appropriate target regions files listed below. For more information on the references, see Import a preloaded reference sequence file and for more information on target regions files, see View and manage target regions files.
|
Reference |
Target Regions file |
Description |
|---|---|---|
|
hg19_AmpliSeq_Transcriptome_V1.2 [1] |
hg19_AmpliSeq_Transcriptome_v1.2 |
The most up-to-date annotations are included in the panel files available from AmpliSeq.com. For more information, see the Ion AmpliSeq™ Transcriptome Human Gene Expression Kit User Guide (Pub. No. MAN0010742). |
|
AmpliSeq_Mouse_Transcriptome_V1 |
AmpliSeq_Mouse_Transcriptome_v1 |
The most up-to-date annotations are included in the panel files available from AmpliSeq.com. For more information, see the Ion AmpliSeq™ Transcriptome Mouse Gene Expression Kit User Guide (Pub. No. MAN0017343). |