Configure the FileExporter plugin

Select from the following options to choose the file types that you export:

Option	Description
Include	Select to generate a separate link for the file in the plugin results.
Archive	Select Archive for each file type that you want to include in a compressed file. You can export a standard compressed directory in a ZIP or tar.bz2 format.

For each option, you can choose to include or archive the following file types:

File types	Description
BAM	Native file format for data generated by Ion instruments.
Variant Call Format (VCF)	File containing only the differences between the BAM file and a reference file.
Variant Caller File (XLS)	Microsoft™ Excel™ format of VCF.
FASTQ	Text format of the nucleotides.

Name the file. Select one of the following:
- Select a unique file name by entering the desired name in the Custom Name text box.
- Create a name using parameters of the run. Drag and drop components from the selections pane onto the name pane row. The naming options are in the blue boxes. The name appears under Example Name.
- Select the delimiter that is used between metadata fields. Support delimiters are dot, dash, and underscore (a naming pattern uses only one delimiter).
1. Name pane row
Click Save Configuration.