Review FileExporter plugin results

After the sequencing run completes, you can download the following files after you run the FileExporter plugin from the report summary:

  • Any of the Torrent Suite™ Software analysis output files that use BAM, VCF, XLS, or FASTQ formats.

  • A compressed file that contains the analysis output files.

  1. In the Data tab, click Completed Runs & Reports.
  2. In the list of runs, find the run of interest, then click the link in the Report Name column.
  3. In the left navigation menu, click FileExporter to view the plugin summary.

    BAM files load quickly, and you may see these files first in the list of links. The other file formats take longer to download, so you may have to wait for the links to the VCF, XLS, and FASTQ formats to appear.

  4. Ensure that the status of the plugin run is Completed. If the status is not Completed or the list of files does not include all the files that you selected when you configured the plugin, click Plugins > Refresh plugins at the top of the Summary screen.
  5. When the list contains all of the files that you want to download, click a file name link under Output Files to download.
  6. To review the parameters that were used for the files, click Show Parameters.